Genome Sequence Analysis: A Survey
نویسندگان
چکیده
منابع مشابه
Genome Sequence Analysis: A Survey
Problem statement: Sequence analysis problems are NP hard and need optimal solutions. Interesting problems include duplicate sequence detection, sequence matching by relevance, sequence analysis using approximate comparison in general or using tools i.e., Matlab and multi-lingual sequence analysis. The usefulness of these operations is highlighted and future expectations are described. Approach...
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The human genome has approximately 3.5 billion base pairs (bp) and is an excellent example for the analysis of eukaryotic genomes. The goal of genome research is to sequence each one of these base pairs so that all the genes and regulatory regions in the genome can be located. This information can then be used to facilitate discoveries in the basic and clinical sciences. Thus, the aim of most l...
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Genome-tools is a Perl module, a set of programs, and a user interface that facilitates access to genome sequence information. The package is flexible, extensible, and designed to be accessible and useful to both nonprogrammers and programmers. Any relatively well-annotated genome available with standard GenBank genome files may be used with genome-tools. A simple Web-based front end permits se...
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Dinoflagellates have among the largest nuclear genomes known, but we know little about their contents or organisation. Given the interest in dinoflagellate ecology, cell biology, and evolutionary biology, there are many reasons to thoroughly investigate the contents of dinoflagellate genomes, but because of their large size the only thorough samples to date have relied on expressed sequence tag...
متن کاملAutomated genome sequence analysis and annotation
MOTIVATION Large-scale genome projects generate a rapidly increasing number of sequences, most of them biochemically uncharacterized. Research in bioinformatics contributes to the development of methods for the computational characterization of these sequences. However, the installation and application of these methods require experience and are time consuming. RESULTS We present here an auto...
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ژورنال
عنوان ژورنال: Journal of Computer Science
سال: 2009
ISSN: 1549-3636
DOI: 10.3844/jcssp.2009.651.660